1. Hello! Time Travelers
2. File Select
3. Shroobs!
4. Peach's Castle
5. Prince Bowser is Here
6. Attack the Enemy
7. Victory!
8. The Time Machine
9. Professor E. Gadd
10. Time Hole (To Past)
11. Listen Up, Now
12. Holli Jolli Village
13. Serious Trouble!
14. Crisis of the Red and Green!
15. Prince Bowser's Castle
16. Time Hole (To Present)
17. Toadwood Forest
18. Ominous
19. Vim Factory
20. The Yoshi Village
21. Yoshi Mountain
22. Yoob's Belly
23. Hello! Time Travelers (No Intro)
24. Gritzy Desert
25. Koopaseum
26. Dark Dungeons
27. King Bowser is Here
28. Thwomp Volcano
29. Thwomp Caverns
30. Bowser & Bowser
31. The Great Mothership
32. Toad Town
33. Star Hill
34. Star Shrine
35. Shroob Castle
36. Overture to the End
37. DESTROY!!
38. Another's Requiem
39. Bye Bye, Babies!
40. Dance with Babies
41. The End